Restructure into src/ layout under pygui package
Move all application source under src/pygui/ and rewire imports, build config, and QML module path to match. - Relocate backend/, serialcomm/, and the ISC QML module into src/pygui/; convert main.py into pygui/__main__.py with a main() entry point (run via `python -m pygui` or the new `isc` script) - Rewrite absolute imports: backend.* -> pygui.backend.*, serialcomm.* -> pygui.serialcomm.* (source + tests) - Move app icons (isc.ico/icns) into packaging/ - Update README and ISC.qmlproject to the new paths
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from pathlib import Path
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from typing import Tuple, Optional
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from datetime import datetime, timedelta
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from pygui.backend.zwafer_models import ZWaferData, Sensor
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# ===== Z-Wafer CSV Parser =====
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class ZWaferParser:
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"""Parses Z-wafer CSV files (header + sensor layout + data rows)."""
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# ===== Public Parse API =====
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def parse(self, file_path: str) -> Tuple[Optional[ZWaferData], Optional[Path]]:
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"""
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Parse a Z-wafer file.
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Returns:
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(ZWaferData, Path) on success
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(None, None) on error (e.g., file not found)
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"""
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try:
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path = Path(file_path)
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if not path.exists():
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raise FileNotFoundError(f"File not found: {file_path}")
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with path.open("r", encoding="utf-8") as f:
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return self._process_header(f), path
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except (ValueError, KeyError):
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raise
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except Exception:
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return None, None
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# ===== Header Parsing =====
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def _process_header(self, file_obj) -> ZWaferData:
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"""Parse header and sensor layout from open file object."""
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wafer_data = ZWaferData()
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labels: Optional[list] = None
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x_coords: Optional[list] = None
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y_coords: Optional[list] = None
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for line in file_obj:
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# Strip trailing comma + whitespace
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line = line.rstrip().rstrip(",").strip()
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if not line or line.replace(",", "").strip() == "":
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continue
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parts = [p.strip() for p in line.split(",")]
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first_part = parts[0].lower()
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# Detect end of header section
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if first_part == "data":
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wafer_data.csv_headers = labels or []
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self._build_sensor_layout(wafer_data, labels, x_coords, y_coords)
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return wafer_data
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# Detect switch from metadata to sensor layout
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# Parse metadata (key=value pairs)
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if not self._parse_header_line(wafer_data, parts):
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# If not metadata, it's part of sensor layout
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label = parts[0].lower()
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values = parts[1:]
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if label == "label":
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labels = values
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elif label == "x (mm)":
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x_coords = values
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elif label == "y (mm)":
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y_coords = values
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return wafer_data # Incomplete file — return partial data
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# ===== Metadata Parsing =====
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def _parse_header_line(self, wafer_data: ZWaferData, parts: list) -> bool:
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"""Parse key=value pairs from header line. Returns True if handled."""
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non_empty_parts = [p for p in parts if p]
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if not non_empty_parts:
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return False
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found_kv = False
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for part in non_empty_parts:
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eq_idx = part.find("=")
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if eq_idx < 0:
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continue
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key = part[:eq_idx].strip()
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value = part[eq_idx + 1 :].strip('=" ')
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found_kv = True
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wafer_data.header[key] = value
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# Extract special fields
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if key.lower() == "acquisition date":
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try:
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from datetime import datetime as dt
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wafer_data.date = dt.strptime(value, "%m/%d/%Y")
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except ValueError:
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wafer_data.date = datetime.min # Fallback on parse error
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elif key.lower() == "wafer id":
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wafer_data.serial = value
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if found_kv and wafer_data.date == datetime.min:
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wafer_data.date = datetime.min
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return found_kv
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# ===== Sensor Layout Parsing =====
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def _build_sensor_layout(
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self,
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wafer_data: ZWaferData,
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labels: Optional[list],
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x_coords: Optional[list],
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y_coords: Optional[list],
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) -> None:
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"""Build sensor list from layout arrays."""
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if not all([labels, x_coords, y_coords]):
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raise ValueError("Sensor layout section is incomplete or missing.")
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if len(labels) != len(x_coords) or len(labels) != len(y_coords):
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raise ValueError(
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f"Mismatched sensor columns: labels={len(labels)}, "
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f"x={len(x_coords)}, y={len(y_coords)}"
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)
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for i in range(len(labels)):
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try:
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wafer_data.sensors.append(
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Sensor(label=labels[i], x=float(x_coords[i]), y=float(y_coords[i]))
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)
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except ValueError as e:
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raise ValueError(f"Invalid coordinate at index {i}: {e}")
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